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R Error In Gzfile(file, "rb") : Cannot Open The Connection

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Who is this Voyager character? Installation errors for DESeq, Genomic Ranges etc. asked 1 year ago viewed 528 times Upcoming Events 2016 Community Moderator Election ends Nov 22 Related 3Cannot install R package in Windows 712Installing packages onto R0Installing packages from source fails How can I ask about the "winner" of an ongoing match? this contact form

Expression evaluates numerically inside of Plot but not otherwise IN operator must be used with an iterable expression Are there continuous functions for which the epsilon-delta property doesn't hold? Similar posts • Search » simpleaffy Hi, Iam trying to run simpleaffy. Is it anti-pattern if a class property creates and returns a new instance of a class? On December 31, 2014 3:29:05 PM PST, John Sorkin <[hidden email]> wrote: >When I try to save a file, I get "Permission denied". >Can someone let me know why this happens? http://stackoverflow.com/questions/15796791/loading-file-into-r

R Error In Gzfile(file, "rb") : Cannot Open The Connection

Expression evaluates numerically inside of Plot but not otherwise more hot questions question feed lang-r about us tour help blog chat data legal privacy policy work here advertising info mobile contact Thanks, Kevin Kevin Ushey October 12, 2015 17:47 2 votes Share Facebook Twitter LinkedIn Google+ Permalink 0 Hi Kevin, Thank you for your reply. more hot questions question feed lang-r about us tour help blog chat data legal privacy policy work here advertising info mobile contact us feedback Technology Life / Arts Culture / Recreation

  1. This would pick the second and third of the existing paths .libPaths( .libPaths()[2:3] ) The inner call retrieves the path vector and the outer call sets it to a reduced vector.
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  6. Also, I did a sweep through the rest of the CDF packages and none of them had the same problem, so all should be well. -J ADD REPLY • link written
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Why is the reduction of sugars more efficient in basic solutions than in acidic ones? MacDonald ♦ 41k United States James W. Because your OS does not allow you to save things there. Cannot Open Compressed File '.httr-oauth', Probable Reason 'permission Denied' It was not very noticeable but check your extensions for case.

DCN:<[hidden email]> Basics: ##.#. ##.#. R Warning In Install.packages Cannot Open Compressed File Why is (a % 256) different than (a & 0xFF)? setRepositories() --- Please select repositories for use in this session --- 1: + CRAN 2: BioC software 3: BioC annotation 4: BioC experiment 5: BioC extra 6: CRAN (extras) 7: Omegahat I followed the instructions on http://www.biocon...

Can't install RBGL Hi,   I am trying to install the library RBGL. Cannot Open Compressed File Probable Reason 'permission Denied' Error in file(con, “r”) : cannot open the connection Using R 3.2.2 in Windows 8.1, I'm trying to import a qiime otu table file, using this code: biom... more stack exchange communities company blog Stack Exchange Inbox Reputation and Badges sign up log in tour help Tour Start here for a quick overview of the site Help Center Detailed Try adding a filename to the path you are saving to.

R Warning In Install.packages Cannot Open Compressed File

Problem with affy I have just updated affy dev package to 1.4.22. https://support.rstudio.com/hc/en-us/community/posts/214311847-Warning-in-install-packages-cannot-open-compressed-file-BH-DESCRIPTION-probable-reason-No-such-file-or-directory- save(TheResults,file="c:\\users\\john\\documents\\test.rda") --------------------------------------------------------------------------- Jeff Newmiller The ..... ..... R Error In Gzfile(file, "rb") : Cannot Open The Connection Developer does not see priority in git Development Workflow being followed How to interpret torque spec ranges? R Error In Gzfile(file, "wb") : Cannot Open The Connection Beausoleil 436215 add a comment| up vote 0 down vote You may have no permission to save file in the directory.

Thanks for pointing this out (with enough detail to fix it), Robert > > Thanks, > > Rich Simon > > Richard Simon, D.Sc. > Chief, Biometric Research Branch > Head, weblink Browse other questions tagged r or ask your own question. Do we have "cancellation law" for products of varieties Why did Michael Corleone not forgive his brother Fredo? repdata <- ReadAffy() eset <- rma(repdata) I first got a message that it autodownloaded hgu133atagcdf and that installation was complete. Cannot Open Compressed File Description

share|improve this answer edited Mar 24 at 12:36 answered Mar 24 at 11:56 BraveDavid 214 This is wrong. Tanushree Wandkar July 31, 2016 10:49 Share Facebook Twitter LinkedIn Google+ Please sign in to leave a comment. connected. navigate here What would be the consequences of a world that has only one dominant species of non-oceanic animal life?

What crime would be illegal to uncover in medieval Europe? Error In Gzfile(file, Mode) : Cannot Open The Connection From a console session you can use: setInternet2(TRUE) (You are correct in thinking this is not due to your library setup. Related 173How do I tar a directory of files and folders without including the directory itself?3unzip huge gz file in Java and performance6How to read gz files in Spark using wholeTextFiles0vba

I didn't get very far.

Warning messages with biocLite() R 3.1.2 from RStudio 0.98.1062 on Windows 8.1 I got the following warnings which are hard to und... Since you are specifying an absolute path, R is not using your working directory. Did a thief think he could conceal his identity from security cameras by putting lemon juice on his face? Gzfile R share|improve this answer answered Sep 11 at 15:39 Joshcodes 3,67212533 add a comment| Your Answer draft saved draft discarded Sign up or log in Sign up using Google Sign up

Reverse a hexadecimal number in bash Wrong way on a bike lane? share|improve this answer answered Apr 17 '15 at 22:01 malineni maurya 11 add a comment| up vote 0 down vote Maybe you should look here. You should educate yourself about your operating system. > >> save(TheResults,file="c:/data") > Error in gzfile(file, "wb") : cannot open the connection > In addition: Warning message: > In gzfile(file, "wb") : his comment is here Then, go to the directory in linux and observe its owner by ls -l.

Need to change cash to cashier's check without bank account (Just arrived to the US) What crime would be illegal to uncover in medieval Europe? Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. How to interpret torque spec ranges? Can someone let me know why this happens?

Any unauthorized use, disclosure or distribution is prohibited. I'd imagine it's more system related. –Ricardo Saporta Apr 3 '13 at 20:02 Could it be that the save command failed due to lack of writing permission? Go Live... MacDonald, M.S.

However, after starting the second plot, I get: Error in gzfile(file, "wb") : cannot open the connection In addition: Warning message: In gzfile(file, "wb") : cannot open compressed file '/var/folders/n9/pw_dz8d13j3gb2xgqb6rfnz00000gn/T/RtmpTfm1Ur/rs-graphics-822a1c83-b3fd-46c3-8028-4e0778f91d0c/4db4b438-ac35-403b-b791-e781baba152c.snapshot', probable more hot questions question feed lang-r about us tour help blog chat data legal privacy policy work here advertising info mobile contact us feedback Technology Life / Arts Culture / Recreation You lack privileges to write into the root directory, which action is the source of the "permission denied" message.

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