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Cannot Run Executables Created With Fc Petsc

Configure will automatically look for MPI compilers mpicc/mpif77 etc and use them if found in your PATH. I don't want MPI make problems? However one can choose a different location where these packages are installed. If not - its best to look at the docs for this compiler - and specify it with the appropriate --with-mpi-include --with-mpi-lib options, [instead of the above] Satish On Fri, 21 http://optimisersonpc.com/cannot-run/cannot-run-executables-created-with-c-petsc.html

Return to Installation Instructions Return to Installation Instructions [petsc-dev] [petsc-maint #45539] petsc installation failure Satish Balay petsc-maint at mcs.anl.gov Fri Apr 30 11:41:01 CDT 2010 Previous message: [petsc-dev] [petsc-maint #45539] petsc However, the binaries generated by MPI wrappers mpicc/mpif77 etc require LD_LIBRARY_PATH to be set to the location of these libraries. Hot Network Questions Dishwasher Hose Clamps won't open How can I take a powerful plot item away from players without frustrating them? I am following the installation instructions but I get an error during the PETSc installation step.

IBM, SGI, Cray etc provide their own: ./config/confiure.py --with-cc=mpcc --with-fc=mpf77 If using MPICH which is already installed [perhaps using myrinet/gm] then use [without specifying --with-cc=gcc etc.so that configure picks up mpicc In this case instead of using ESSL we suggest --download-f-blas-lapack=yes. Barry Smith Re: [petsc-users] Building PETSc with I... However - if there is any MPI code in user application, then its best to install a full MPI - even if the usage is currently limited to uniprocessor mode. ./configure

OpenCL/ViennaCL builds of PETSc currently work on Apple OSX, Linux, and Microsoft Windows. I saw a lot of libs under > > > the directory, such as libmpi.a, libmpi_ipl64.a, libmpi_mt.a, etc. > > >  > > > Thanks a lot, > > > Qin Browse other questions tagged osx osx-snow-leopard macports finite-element-analysis or ask your own question. For example, check config/config.packages/SuperLU.py for the url for download this package.

Note that if --prefix is used then $PETSC_ARCH is not included in the above directories nor is -${PETSC_ARCH} included in the module file name.

Return to Installation Instructions Installing on So if you need a project file for use with PETSc - please do the following. Did a thief think he could conceal his identity from security cameras by putting lemon juice on his face? http://www.mcs.anl.gov/petsc/petsc-3.2/docs/installation.html Why did Borden do that to his wife in The Prestige?

However, the binaries generated by MPI wrappers mpicc/mpif77 etc require LD_LIBRARY_PATH to be set to the location of these libraries. IBM, SGI, Cray etc provide their own. ./config/confiure.py --with-cc=mpcc --with-fc=mpf77 If using MPICH which is already installed [perhaps using myrinet/gm] then use [without specifying --with-cc=gcc etc.so that configure picks up One can specify mpiexec or mpiexec with the options --with-mpiexec Return to Installation Instructions Microsoft Windows Installation: Are you sure you want to use MS/Windows? Qin Lu Reply via email to Search the site The Mail Archive home petsc-users - all messages petsc-users - about the list Expand Previous message Next message The Mail Archive home

  • The debuggers can be initiated using Microsoft Visual Studio 6: msdev ex1.exe, Microsoft Visual Studio .NET: devenv ex1.exe, Intel Enhanced Debugger: edb ex1.exe, or GNU Debugger gdb ex1.exe.
  • I would really appreciate it if someone can help.
  • i.e sudo mkdir /opt/petsc sudo chown user:group /opt/petsc cd /opt/petsc tar -xzf petsc-3.2-p0.tar.gz cd petsc-3.2-p0 ./configure make One can also use the gnu prefix-install mode. [untar PETSc in a non-root regular
  • or when running a code compiled with OpenMPI -bash-3.3$ ./conftest
    ./conftest: error while loading shared libraries: libmpi.so.0: cannot open shared object file: No such file or directory Notes: Avoid specifing
  • Configure will automatically look for blas/lapack in certain standard locations, on most systems you should not need to provide any information about BLAS/LAPACK in the ./configure command.
  • Configure will proceed to install this package and then configure PETSc with it. --download-mpich=/home/petsc/mpich2-1.0.4p1.tar.gz --with-PACKAGENAME-dir=PATH : If the external package is already installed - specify its location to configure [it will
  • Make sure your environment is properly configured to use the appropriate debugger for your compiler.
  • sudo mkdir /opt/petsc sudo chown user:group /opt/petsc cd /opt/petsc tar -xzf petsc-3.7.0.tar.gz cd petsc-3.7.0 ./configure make Installing with --prefix: One can also use the GNU --prefix install mode. ./configure --prefix=/opt/petsc/petsc-3.7.0 [other
  • Can you compile and run > > > >code with your C/C++ (and maybe Fortran) compilers? > > > > See http://www.mcs.anl.gov/petsc/documentation/faq.html#libimf > > > > ******************************************************************************* > > > > 

PETSc Win32 front end - win32fe: This tool is used as a wrapper to Microsoft/ Borland/ Intel compilers and associated tools - to enable building PETSc libraries using cygwin make and click here now asked 5 years ago viewed 778 times active 4 years ago Upcoming Events 2016 Community Moderator Election ends Nov 22 Related 3Anyone get python26 install in Snow Leopard via Macports?1MacPorts on Thus one can install multiple variants of PETSc libraries - by providing different PETSC_ARCH values to each configure build. We use some of these scripts locally for testing - for example one can update these files and run as: config/examples/arch-osx-10.6.py Using the bash shell, assuming BLAS, LAPACK, MPICH are

Within this shell - run cygwin bash.exe as: c:\cygwin\bin\bash.exe --login verify if the compilers are useable [by running cl, ifort in this shell] Now run configure with win32fe and then build This needs to be invoked with the correct information for the installed TAU and PDT packages. Compiling PETSc with no debugging, this should only be done for timing and production runs. PETSc Win32 front end - win32fe: This tool is used as a wrapper to Microsoft/ Borland/ Intel compilers and associated tools - to enable building PETSc libraries using cygwin make and

Now use tau_cc.sh as compiler to PETSc configure. from within PETSc aplications. I Don't want MPI Check the bug-reporting section Example Usages: Examples are at config/examples/*.py. Make sure the OpenCL headers are available on your system by e.g.

All development should be done when configured using --with-debugging=1 ================================================================================= TESTING: configureArchitecture from PETSc.utilities.arch(/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/work/petsc-3.0.0-p11/config/PETSc/utilities/arch.py:39) TESTING: configureSharedLibraries from PETSc.utilities.sharedLibraries(/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/work/petsc-3.0.0-p11/config/PETSc/utilities/sharedLibraries.py:41) TESTING: configureDynamicLibraries from PETSc.utilities.sharedLibraries(/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/work/petsc-3.0.0-p11/config/PETSc/utilities/sharedLibraries.py:64) TESTING: configureBmakeDir from PETSc.utilities.bmakeDir(/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/work/petsc-3.0.0-p11/config/PETSc/utilities/bmakeDir.py:26) TESTING: checkRestrict from config.compilers(/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/work/petsc-3.0.0-p11/config/BuildSystem/config/compilers.py:134) TESTING: For example - if using VS2005 C and Intel 10 Fortran one can do: Start -> Programs -> Intel Software Development Tools -> Intel Fortran Compiler 10 -> Visual Fortran Build In these cases, --with-PACKAGENAME-include --with-PACKAGENAME-lib options should be prefered.

And PETSc primarily relies on a unix envirment for build tools.

This is my pillow Does f:x mean the same thing as f(x)? If this machine uses a batch systemto submit jobs you will need to configure using ./configure with theadditional option --with-batch.Otherwise there is problem with the compilers. The configure.log is > > > > attached. > > > >  > > > > ******************************************************************************* > > > >                    UNABLE One can switch to using optimzed mode with the toggle option --with-debugging [defaults to debug enabled].

Satish Balay Re: [petsc-users] Building PETSc with Intel ... I have installed the gcc43 and python26 ports and use the default architecture x86_64 for Snow Leopard. $ sudo port install -d petsc Password: xxxxxx ---> Computing dependencies for petsc ---> Yes, the cause seems to be the same. –Raiyan Kabir Dec 2 '10 at 1:12 add a comment| Your Answer draft saved draft discarded Sign up or log in Sign Comparing the two configure.log files I detected that I had a broken /usr/bin/gfortran in my PATH; configure.py detected this executable and tried to use it.

Why isn't it > >> suggesting --with-batch??? > >> > >> Well, look what happens ----- > >> > >> In checkCCompiler() it builds an executable and seems to run without For additional info, run ${PETSC_DIR}/bin/win32/win32fe without any options. The versions and locations of Thrust and Cusp you should use are listed in $PETSC_DIR/config/PETSc/packages/cuda.py. Make sure the following cygwin components are installed.

Can you compile and run code with your compiler '/usr/local/bin/mpif90'? > > ******************************************************************************* Does /usr/local/bin/mpif90 exist and is it able to compile a simple fortran file?

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